BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003G12SP1|AL425187
(979 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig647 1882 0.0
>3x_Contig647
Length = 1778
Score = 1882 bits (939), Expect = 0.0
Identities = 961/979 (98%)
Strand = Plus / Minus
Query: 1 gatcgatccgaacttctttctaatctcatccagagacaattgaggagcgttcaaagttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 gatcgatccgaacttctttctaatctcatccagagacaattgaggagcgttcaaagttcc 1423
Query: 61 atcgttatacgattcaaccaattgaaccaattcttcagccaatggaacattatcggtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 atcgttatacgattcaaccaattgaaccaattcttcagccaatggaacattatcggtgaa 1363
Query: 121 caattcagcgaattgatagttataagtggacaaggccaccccgccgacgtagaagacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 caattcagcgaattgatagttataagtggacaaggccaccccgccgacgtagaagacagt 1303
Query: 181 agtagcagcacctaatttccatagaaagtttctgaagggacgggccgttttaactggaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 agtagcagcacctaatttccatagaaagtttctgaagggacgggccgttttaactggaac 1243
Query: 241 gttggtagaggcaaacctctgaccaagagctttgcttgcacggaacatatcgtaagtaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 gttggtagaggcaaacctctgaccaagagctttgcttgcacggaacatatcgtaagtaga 1183
Query: 301 aagggacacagacaaccagaggcgagcttatgcgagcttgctcaagaacaaatggatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 aagggacacagacaaccagaggcgagcttatgcgagcttgctcaagaacaaatggatgga 1123
Query: 361 gacaataataggtttattcaacaatcattcgaggcaacatagtaacgattgaatcgtagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 gacaataataggtttattcaacaatcattcgaggcaacatagtaacgattgaatcgtagc 1063
Query: 421 taatatgtctggatgaatttgcttgagtgaaaaaaaaaaagcacataaagacttgcaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 taatatgtctggatgaatttgcttgagtgaaaaaaaaaaagcacataaagacttgcaaag 1003
Query: 481 gatggtatgtaacctactgactatttacccggacttatttgtccgggtaacaattaccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 gatggtatgtaacctactgactatttacccggacttatttgtccgggtaacaattaccaa 943
Query: 541 aaacgaaaaaaaggaactataatcaaacttgaaggaagccaacattcagtcacgtgaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 aaacgaaaaaaaggaactataatcaaacttgaaggaagccaacattcagtcacgtgaata 883
Query: 601 aattktkttcatktgacctktatactttkattccttcacctccatccctaaacatatact 660
|||| | ||||| |||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 882 aattgtgttcatgtgacctgtatactttgattccttcacctccatccctaaacatatact 823
Query: 661 acttktccagctcgagtaattyycacccttckcttytkcccctcccccgccccaatcaga 720
|||| |||||||||||||| |||||||| ||| | ||||||||||||||||||||||
Sbjct: 822 acttgtccagctcgagtaaaacccacccttcgcttctgcccctcccccgccccaatcaga 763
Query: 721 ggccgccaatgaccgttattgcccacttaaaaaatatcccgcattatccgggcaacccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ggccgccaatgaccgttattgcccacttaaaaaatatcccgcattatccgggcaacccaa 703
Query: 781 ggaatattacaccagtcaaattccgtccaaccggaactcaattcctaaaccagtataaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ggaatattacaccagtcaaattccgtccaaccggaactcaattcctaaaccagtataaaa 643
Query: 841 aaccttcagcagcagaacatccagcaaacccgwtcgcaaatktgwtytttttcctcccta 900
|||||||||||||||||||||||||||||||| |||||||| || | |||||||||||||
Sbjct: 642 aaccttcagcagcagaacatccagcaaacccgatcgcaaatgtgatctttttcctcccta 583
Query: 901 cttctccaattatacattccccactagtatactttttttccgcttgyctatttcaggtgt 960
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 582 cttctccaattatacattccccactagtatactttttttccgcttgcctatttcaggtgt 523
Query: 961 acggttccgacaaacgggg 979
|||||||||||||||||||
Sbjct: 522 acggttccgacaaacgggg 504
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,348
Number of Sequences: 1807
Number of extensions: 11348
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 979
length of database: 10,358,551
effective HSP length: 16
effective length of query: 963
effective length of database: 10,329,639
effective search space: 9947442357
effective search space used: 9947442357
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)